| Petition to the House of Lords for a registry of all presentations, 2/19/1647 (5:316-317), 118 | | |
| Petition to both houses of parliament for the establishment of presbyteries, 2/13/1646 (5:298-299), 102 | | |
| Memorandum about church government, 9/18/1645 (5:249), 89 | | |
| Paper with examples of discipline in other churches, 8/18/1645 (5:237-248), 88 | | |
| Petition to both houses of parliament for minister and elders to be permitted to carry out the discipline of the church, 8/7/1645 (5:232-235), 83 | | |
| Petition to both houses of parliament for ministers and elders to be permitted to carry out the discipline of the church, 7/31/1645 (5:228-231), 81 | | |
| Advice for a committee of the House of Commons about the boundaries of presbyteries and selection of elders, 5/30/1645 (5:193-194), 71 | | |
| Additional votes on church government submitted to both houses of parliament, 7/3/1645 (5:22-223), 78 | | |
| The directory for church government submitted to both houses of parliament, 7/3/1645 (5:204-221), 77 | | |
| Petition to the House of Commons regarding the divine right of church discipline, 6/16/1645 (5:198-199), 73 | | |
| Paper for a committee of the House of Commons on congregational elderships and the membership of classical, provincial and national ecclesiastical assemblies, 6/4/1645 (5:195-197), 72 | | |
| Directory concerning admonition, excommunication, and absolution, submitted to both houses of parliament, 2/3/1645 (5:168-172), 58 | | |
| Advice concerning excommunication submitted to both houses of parliament, 2/3/1645 (5:167), 57 | | |
| Draft directory for church government submitted to both houses of parliament, 12/11/1644 (5:127-138), 45 | | |
| Explanation for both houses of parliament of the second proposition of church government, 11/14/1644 (5:113), 39 | | |
| Paper for both houses of parliament concerning a part of church government, 11/8/1644 (5:90-92), 35 | | |
| List of ministers to perform ordinations in London, submitted to the House of Commons, 9/18/1644 (5:89), 33 | | |
| Paper for the House of Commons regarding ordination as an ‘ordinance of Christ’ and ministers ruling, 9/4/1644 (5:84-86), 30 | | |
| A second directory for ordination pro tempore, submitted to the House of Commons, 8/26/1644 (5:78-84), 29 | | |
| Paper for the House of Commons containing proposed amendments to the directory for ordination, 8/26/1644 (5:75-77), 28 | | |
