| Scripture proofs for the shorter catechism, submitted to both houses of parliament, 4/12/1648 (5:338), 132 | | |
| Scripture proofs for the larger catechism, submitted to both houses of parliament, 4/12/1648 (5:339), 133 | | |
| An answer to the reasons of the dissenting brethren against the proposition concerning ordination, 4/19/1648 (5:340), 134 | | |
| Scriptural proofs for the Confession of Faith, submitted to both houses of parliament, 4/26/1647 (5:322), 121 | | |
| Revisions of Thirty-nine Articles, submitted to both houses of parliament, 4/26/1647 (5:323-328), 122 | | |
| Advice concerning a Larger Catechism, submitted to both houses of parliament, 10/22/1647 (5:332-333), 127 | | |
| Advice concerning a shorter catechism, submitted to both houses of parliament, 11/25/1647 (5:336), 129 | | |
| The answer of the assembly of divines to the reasons of the dissenting brethren against the proposition concerning the subordination of congregational, classical, provincial, and national assemblies, 8/19/1646 (5:307), 111 | | |
| Draft of the first nineteen chapters of the Confession of Faith, submitted to both houses of parliament, 9/25/1646 (5:308-309), 112 | | |
| Confession of Faith without proof-texts, submitted to both houses of parliament, 12/4/1646 (5:314), 116 | | |
| A psalter submitted to both houses of parliament, 11/12/1645 (5:259), 94 | | |
| Answer to the reasons of the dissenting brethren against the instance of the church of Ephesus, 10/13/1645 (5:250-251), 91 | | |
| The directory for church government submitted to both houses of parliament, 7/3/1645 (5:204-221), 77 | | |
| Sub-directories for the directory for public worship submitted to both houses of parliament: fasting, thanksgiving, and singing psalms, 12/27/1644 (5:154-158), 53 | | |
| An appendix for the directory for public worship, submitted to both houses of parliament, 12/30/1644 (5:159), 54 | | |
| Directory concerning admonition, excommunication, and absolution, submitted to both houses of parliament, 2/3/1645 (5:168-172), 58 | | |
| Dissent of the congregationalists about excommunication, 2/3/1645 (5:173), 59 | | |
| Answer of the assembly to the dissent of the congregationalists about excommunication, 2/6/1645 (5:174-175), 60 | | |
| Title for the Directory for public worship submitted to both houses of parliament, 3/6/1645 (5:178), 62 | | |
| Preface for the directory for public worship submitted to both houses of parliament, 11/20/1644 (5:118-120), 42 | | |
